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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015900606.1_cds_XP_016450603.1_45036
CDS Infomation

[gene=LOC107775393] [db_xref=GeneID:107775393] [protein=pectin acetylesterase 12-like] [protein_id=XP_016450603.1] [location=complement(join(189297..189404,189529..189674,189762..189867,189971..190048,190133..190186,190779..190839,190959..191083,191159..191245,192035..192108,192194..192323,192853..192935,193542..193773))] [gbkey=CDS]
Sequence

ATGTCGAAGCTTTTCATGGGGTTCTGGGGTGTGTTTTTTGCTGGGTTTTTCTTGTCTAGC
AAATTGGTGTATTCTTATGAAGTTGAAGAAGAATTCTTTTTCAATAAAACAGAGGGCCCA
TTCTTTGAGTCTGTTTATGAAACCTCTGCTGCTGCTGCTGCTGCTGGCATTAATCCCACT
CCTCTTATGATTGGTCTTACGCTCATCCCTGATGCTGCTGCTAGAGGAGCTGTGTGTTTA
GATGGAACTCTACCAGGTTATCACATACATCCAGGTTCTGGGTCAGGGGCAAACAGTTGG
CTCATTCAATTGGAGGGTGGAGGATGGTGTAACAGTGTTAGAAATTGTGTTTATCGCAAA
ACGACTAGACGCGGCTCATCAAAGTTCATGGAAAAGCAGATTCCATTTACTGGGATTTTA
AGTAACAAGGCTGAAGAAAATCCAGATTTTTTTAACTGGAATAGAGTAAAAGTTCGTTAC
TGCGACGGCGCCTCCTTTGCAGGGGACAGTGAGAATAAGGCTGCGCAGCTGCAATTTAGA
GGTCAGCGTATATGGGAAGCGGCAATGGCCGAGTTAATGTCAAAAGGAATGCGTAATGCC
CAGCAGGCTCTTCTCTCTGGATGTTCTGCTGGTGGTCTAGCTTCAATATTGCATTGTGAC
GAGTTCCGAACTTTGTTCCCAAGTAGTACCAAAGTGAAGTGCCTAAGTGATGCAGGATTA
TTTATGGATGCAACGGATGTATCCGGGGGGCACGCCCTCAGAAATTTATTTCAAGGCGTA
GTTAGTGTGCAGGGTCTTCAGAAGACACTACCAAGTACTTGTACCAGCAAACTTGATCCA
ACCTCGTGCTTCTTTCCTCAGAATTTGATCAGCAATATCAAGACCCCTCTATTTCTACTA
AATGCTGCCTATGATTCCTGGCAGGTTCAATCCAGTTTGGCTCCTCCAGTAGCTGATCCT
AAGGGCTTGTGGCATGATTGTAAACTCAACAATGAACAGTGTTCTGCATCACAAATTCAA
TTTCTGCAAGGTTTCAGGAATGACATGCTAAATGCTGTTAAAGGCTTCGCTGCCTCAACA
CAAAATGGTCTCTTCATAAACTCATGCTTCGCGCACTGCCAATCGGAGAGGCAGGATACG
TGGTTTGCTGATGATTCTCCCCTTATCGATAACAAGCCGGTTGCACTTGCAGTTGGAGAT
TGGTATTTTGATAGAGCAGGCGTGAAGTCAATTGACTGTGCTTATCCATGCGATAAAACA
TGTCACAACCTGGTCTTCAAATAA

Peptide Sequence

PEP ID

XP_016450603.1
PEP Infomation

PREDICTED: pectin acetylesterase 12-like [Nicotiana tabacum]
Sequence

MSKLFMGFWGVFFAGFFLSSKLVYSYEVEEEFFFNKTEGPFFESVYETSAAAAAAGINPT
PLMIGLTLIPDAAARGAVCLDGTLPGYHIHPGSGSGANSWLIQLEGGGWCNSVRNCVYRK
TTRRGSSKFMEKQIPFTGILSNKAEENPDFFNWNRVKVRYCDGASFAGDSENKAAQLQFR
GQRIWEAAMAELMSKGMRNAQQALLSGCSAGGLASILHCDEFRTLFPSSTKVKCLSDAGL
FMDATDVSGGHALRNLFQGVVSVQGLQKTLPSTCTSKLDPTSCFFPQNLISNIKTPLFLL
NAAYDSWQVQSSLAPPVADPKGLWHDCKLNNEQCSASQIQFLQGFRNDMLNAVKGFAAST
QNGLFINSCFAHCQSERQDTWFADDSPLIDNKPVALAVGDWYFDRAGVKSIDCAYPCDKT
CHNLVFK

Transcript Sequence

Gene sequence data has not been registered.